NAME

qcat-eval-truth - Command line interface to barcode detection library

DESCRIPTION

WARNING:root:Could not load pysam. To use qcat-eval-full please install mappy. usage: qcat-eval-truth [-h] -t TSV -n NAME -g GENOMES [--max MAX] [FASTQ]

Command line interface to barcode detection library

positional arguments:

: FASTQ

options:

-h, --help: show this help message and exit

-t TSV, --tsv TSV

-n NAME, --name NAME

-g GENOMES, --genomes GENOMES

--max MAX