FASTAQ-TO_ORFS_GFF(1)

User Commands

FASTAQ-TO_ORFS_GFF(1)

NAME

fastaq_to_orfs_gff - Writes a GFF file of open reading frames

DESCRIPTION

usage: fastaq_to_orfs_gff [options] <infile> <outfile>

Writes a GFF file of open reading frames from a sequence file

positional arguments:

infile: Name of input file
outfile: Name of output GFF file

options:

-h, --help: show this help message and exit
--min_length INT: Minimum length of ORF, in nucleotides [300]

December 2023

fastaq_to_orfs_gff 3.17.0