COVES-SE(1) User Commands COVES-SE(1)

coves-SE - detection of transfer RNA genes in genomic sequence

FATAL: Usage: coves [-options] <CM file> <seqfile> where options are:

: show all pairs, not just Watson-Crick

-g <gcfrac> : set expected background GC composition (default 0.5)

: mountain representation of structural alignment
: secondary structure string representation of
structural alignment


This manpage was written by Nilesh Patra for the Debian distribution and
can be used for any other usage of the program.

July 2021 coves-SE 2.0.9+ds